(Warning! Possible Major Spoilers)
1. Traveled to the Strip
2. Talk to Mr. House
3. Find Benny and immediately kill him
4. Talk to Yes Man and start his quest line
5. Take the Platinum Chip to the bunker under the Fort without taking it back to Mr. House first (following Yes Man's advice)
6. Activate the AI upgrade
7. Travel to Hoover Dam and start Colonel Moore's quest (For the Republic, Part 2)
8. Kill Mr. House
Now, here is where the problem starts. It was always my intention to team up with the NCR but when I kill Mr. House I get negative karma. Which I don't quite understand since he doesn't seem like a very nice person. But it also turns out that completing The House Always Wins quest to a certain point makes the For the Republic, Part 2 quest fail. But even if it was still available the requirements for saving the president are very high (50 speech, repair and explosives!?) and we are both already level 30.
So, basically we're both thoroughly confused by the storyline, we've failed a number of quests for reasons I can't possibly explain, and even if we team up with the NCR we can't complete their main quest.
I stopped playing a couple weeks ago because I was just to frustrated but my wife kept plugging away only to run into the same difficulties this morning.
Is it worth starting over from the beginning or should we just choose a different side to team up with and just end this game?
Just for the record, neither of us had any problems with FO3 storyline/quests.
-JJ