Inabiltiy to upgrade the cellar with majority of the options within the Morthal associated house (i.e. smelta, drafting table; 9 divines table, mead barile etc.)? The illustrated options as well as many others, are not present when crafting, but do appare when crafting in the other two houses.
Inability to have taxidermies with the trophy room, albeit the option did appare twice and was created twice, but with the same outcome?
Inability to have the greenhouse plants/ingredients containment objects, albeit the option had appare twice and was created twice, but with the same outcome?
I believe the last two issues are irrelevant to location.