Currently playing PC's to see all four endings. Once that's done however I'll start playing my 'real' character who will hopefully want to continue playing past the MQ and into just exploring everything and doing additional quest.

So which faction leaves the Common Wealth with the best set-up as far and continuing questing and playing?

The minutemen (Friendly BoS) ending is the answer to me.

You keep BoS and RR up and running and get a stream of new post MQ quests.

(Smuggling synths away from the commonwealth,selling reactor coolant to the BoS etc..)

The game feels good since your companions are happy about what you did and you only lose that courser-guy companion.

If you complete the game with the Institure it feels very wierd because you become some kind of entitled-i know whats best for everyone-outcast above ground.

The BoS ending is also cool,being a Sentinel is dope and their are not as bad and extremists as they are made out to be.

Basically the Minutemen ending is similar to the BoS ending but you are giving synths a chance at survival this way (Also quests).

Institute needs to be the worst, I replaced the retention guy with someone new and now I can't find her and don't know who else to talk to.

BoS/MM or MM/BoS/RR are the best. I'm partial to the first set up.

Probably the MM/BoS ending (but do the Minutemen ending not the BoS ending, since I think BoS takes over Diamond City in the BoS ending). If you want the most radiant quests though then you'd need the MM/BoS/RR ending though I feel like in this ending the BoS and RR are bound to go to war in the future.

Doing the BoS ending or the MM/Bos ending is almost identical.Only difference will be whose flag flies over diamond city.However the flags are more due to popular acclamation than conquer.

Also i prefer the MM/BOS/RR ending.I'm sure RR and BoS are bound to clash in the future.But I won't have the blood of any of those people on my hands.

They don't take over. Some knights show up in the market, but if you talk to them they say they are just there on a supply run.

It's not a war, it's a slaughter without the plot armor from the SS. They're already on the verge of dying.