I reinstalled it after getting the bug, but that didn't seem to help. I don't know for sure which version, but I think it would be the most recent. Would it have something to do with updating the game itself, or Steam?
I remember this happening to me. You need the right GECK version. Start the GECK and go into the help menu at the top. Select the "about" option. Youll find version info there.
Im able to load falloutnv.esm on my copy.
http://fallout.gamesas.com/eng/downloads/updates-GECK-fnv-eula.php <------ This should be the right version