Ok, updated to 1.2 today and the game runs much better than before. I am still getting some studdering, but I think that's related to the auto-save feature. Ever since the update though some water gets bad texture problems. The water in Whiterun specifically looks terrible. It doesn't look like it is moving at all, its a green colour, and I keep getting weird silverish flashes off of it. It has happened else where but Whiterun specifically. Not a game breaker, just reporting it. Thanks!

Which water in whiterun. I was in whiterun when i read your post and i was curious of i had any issue so i checked it out, but everything seems ok to me.

Its the water that's in the stream by the front door. Most specifically between the front wall and the smithing station Sorry, should have been more specific!