First make sure your spouse is only equipped with their base equipment that you can't trade from them. Once your spouse sets up shop in your home ask what they have for sale and look in that list for their base armor/equipment (for mjoll it's banded iron armor) and buy that equipment from them...they should be naked now.
Now you can give them whatever clothes or armor you want them to wear and they should keep that on instead or stay in their undies if you prefer. Mjoll normally will only wear heavy armor but i have her in a dress, cooking home cooked meals...i've effectively tamed the lioness

I would recommend selling the base equipment to another vendor just to be sure it doesn't return