I been running the kit and think this is something odd that warpaints and such now will not show up in the kit but are on their respectful characters in the game so what could be missing from the kit if anything?

That's odd, it's usually the other way around. At least that's better than the warpaints and such NOT showing up in-game, which I find rather aggravating. BTW, which preview box do you have checked in the actor windows, because I know that in the head view, things like scars do not show up with the exception of Argonians, whose face simply disappear instead. Also, is it not showing up regardless of where you are in the kit or just a few places?